화학공학소재연구정보센터
Journal of the American Chemical Society, Vol.136, No.16, 5956-5962, 2014
Mechanistic Aspects of Hydration of Guanine Radical Cations in DNA
The mechanistic aspects of hydration of guanine radical cations, G(center dot+) in double- and single-stranded oligonucleotides were investigated by direct time-resolved spectroscopic monitoring methods. The G(center dot+) radical one-electron oxidation products were generated by SO4 center dot- radical anions derived from the photolysis of S2O82- anions by 308 nm laser pulses. In neutral aqueous solutions (pH 7.0), after the complete decay of SO4 center dot- radicals (similar to 5 mu s after the actinic laser flash) the transient absorbance of neutral guanine radicals, G(-H)(center dot) with maximum at 312 nm, is dominant. The kinetics of decay of G(-H)(center dot) radicals depend strongly on the DNA secondary structure. In double-stranded DNA, the G(-H)(center dot) decay is biphasic with one component decaying with a lifetime of similar to 2.2 ms and the other with a lifetime of similar to 0.18 s. By contrast, in single-stranded DNA the G(-H)(center dot) radicals decay monophasically with a similar to 0.28 s lifetime. The ms decay component in double-stranded DNA is correlated with the enhancement of 8-oxo-7,8-dihydroguanine (8-oxoG) yields which are similar to 7 greater than in single-stranded DNA. In double-stranded DNA, it is proposed that the G(-H)(center dot) radicals retain radical cation character by sharing the NI-proton with the N3-site of C in the [G(center dot+):C] base pair. This [G(-H)(center dot):H+C reversible arrow G(center dot+):C] equilibrium allows for the hydration of G(center dot+) followed by formation of 8-oxoG. By contrast, in single-stranded DNA, deprotonation of G(center dot+) and the irreversible escape of the proton into the aqueous phase competes more effectively with the hydration mechanism, thus diminishing the yield of 8-oxoG, as observed experimentally.