In many batch processes, there are related or independence relationships among process variables. The traditional monitoring method usually carries out a single statistical model according to the related or independent method, and in the feature extraction there is not fully taken into account the characterization of fault information, it will make the process monitoring ineffective, so a fault monitoring method based on WGNPE (weighted global neighborhood preserving embedding)-GSVDD (greedy support vector data description) related and independent variables is proposed. First, mutual information method is used to separate the related variables and independent variables. Secondly, WGNPE method is used to extract the local and global structures of the related variables in batch process and highlight the fault information, GSVDD method is used to extract the process information of the independent variables quickly and effectively. Finally, the statistical monitoring model is established to achieve process monitoring based on WGNPE and GSVDD. The effectiveness of the proposed method was verified by the penicillin fermentation process. (C) 2018 The Chemical Industry and Engineering Society of China, and Chemical Industry Press. All rights reserved.