The intergranular corrosion (IGC) behavior of an extruded 6005A alloy profile with the coexisting of peripheral coarse grain (PCG) structure and partial recrystallized grain (PRG) structure was investigated by using an accelerated corrosion test, electrochemical impedance spectroscopy and a quasi in situ examination of IGC process. PCG structure was found to have a unique IGC behavior that pitting corrosion and subsequent IGC are less severe and will not be transformed into intragranular corrosion as they were found in PRG structure. Microstructure characterization reveals that the microstructural differences in grain boundary precipitates, primary alpha-AlFeMnSi intermetallic particles and grain characteristic between PCG structure and PRG structure are the reason for these phenomena. Further analysis indicates that the grain boundaries decorated with more AlFeMnSi particles and Q phase precipitates are more sensitive to corrosion, where Q phase precipitates are the primary cathodes and the most important factor affecting IGC; AlFeMnSi particles are supposed to initiate pitting corrosion since they are dissolved as anodes in the early stage of corrosion. With the development of corrosion, they are transformed into cathodes and become the bridges of IGC propagation by connecting the Q phase precipitates at grain boundary. In addition, grain characteristic was also found to have great effects on IGC. With the decrease in grain size and the increase in the frequency of high-angle grain boundaries and the dislocation density, corrosion becomes more severe and more likely to be transformed into intragranular corrosion.