Science, Vol.279, No.5356, 1504-1513, 1998
Crystal structures of human topoisomerase I in covalent and noncovalent complexes with DNA
Topoisomerases I promote the relaxation of DNA superhelical tension by introducing a transient Single-stranded break in duplex DNA and are vital for the processes of replication, transcription, and recombination, The crystal structures at 2.1 and 2.5 angstrom resolution of reconstituted human topoisomerase I comprising the core and carboxyl-terminal domains in covalent and noncovalent complexes with 22-base pair DNA duplexes reveal an enzyme that "clamps" around essentially B-form DNA, The core domain and the first eight residues of the carboxyl-terminal domain of the enzyme, including the active-site nuleophile tyrosine-723, share significant structural similarity with the bacteriophage family of DNA integrases. A binding mode for the anticancer drug camptothecin is proposed on the basis of chemical and biochemical information combined with these three-dimensional structures of topoisomerase I-DNA complexes.
Keywords:CAMPTOTHECIN RESISTANCE;CATALYTIC ACTIVITY;ANTITUMOR-ACTIVITY;TERMINAL FRAGMENT;EUKARYOTIC TOPOISOMERASE;CLEAVABLE COMPLEXES;POINT MUTATION;BINDING-SITE;WHEAT-GERM;IDENTIFICATION