Temperature modulated differential scanning calorimetry (TMDSC), variable heating rate DSC, and tapping atomic force microscopy (AFM) were used to study semi-crystalline liquid crystalline polymers (LCPs). Main chain LCPs included a random copolyester (Vectra(R) A950) and an azomethine alternating copolymer. For the azomethine LCP the TNMSC non-reversing signal detected broad exothermic transitions associated with melting and recrystallization as the slow DSC heating scan induced surprisingly large morphological changes. Non-isothermally crystallized Vectra(R) and some isothermally crystallized samples at lower temperatures exhibited different levels of DSC scan induced crystal reorganization. Such crystal metastability was also studied by variable heating rate DSC and an independent technique for estimating the melting point at very rapid heating rates. The TMDSC characterization of the scan induced crystal perfection in Vectra(R) was substantially different than for the other polymers studied. In most cases even though crystal perfection was occurring, no clear exotherm was detected in the non-reversing signal. High temperature annealing for long times resulted in degrees of crystal perfection which could be studied by DSC with minimal scan induced reorganization. High resolution tapping AFM was used to elucidate details of crystal morphology for mechanically oriented and non-oriented Vectra(R) before and after annealing. Structures resembling lamellae were found to be oriented perpendicular to the chain direction in the oriented Vectra(R). In the non-oriented film broad and sometimes curved 'lamellae' were detected. They were about 1000 nm long and between 20 and 35 nm wide, with the width increasing slightly as a function of increased annealing time at 260 degreesC melt crystallization conditions. Substructure of the lamellae in both oriented and non-oriented Vectra(R) consisted of smaller stacked crystallites which are detected by AFM studies of these surfaces. (C) 2003 Elsevier Science Ltd. All rights reserved.