In recent years, biofiltration has been increasingly applied as an air pollution control technology to minimize or eliminate emissions of volatile organic compounds from industrial sources and environmental remediation activities. Although the ability of this technology to maintain high removal efficiency during relatively steady loading conditions has been well established for many waste streams, relatively little research has focused on development of operating strategies that could improve treatment performance during transient loading conditions typical of industrial operations. In the research described herein, two operating strategies were evaluated over a period of 295 days in biofilters treating a model waste gas stream containing a two-component mixture of methyl ethyl ketone (MEK) and toluene. One biofilter was operated as a sequencing batch biofilter (SBB), and the other was operated as a conventional continuous-flow biofilter (CFB). During "normal" steady loading conditions, the model waste stream contained MEK concentrations ranging from 80 to 89 ppm(v) and toluene concentrations ranging from 28 to 30 ppm(v). Both biofilter operating strategies resulted in stable long-term performance with greater than 99% contaminant removal during these normal loading conditions. On a regular basis, the influent MEK and toluene concentrations were temporarily increased to five times the normal influent concentration for the duration of 1 h to test performance during transient "shock loading" conditions. Biofilter performance during the model shock loading conditions demonstrate that SBB operating strategies can result in superior treatment in two important areas: (1) overall mass of contaminants removed and (2) minimum instantaneous removal efficiency. (C) 2004 Wiley Periodicals, Inc.