We demonstrated the fabrication of size-controlled two-dimensional iron oxide nanodots derived from the heat treatment of ferritin molecules self-immobilized on modified silicon surfaces. Ferritin molecules were immobilized onto 3-aminopropyltrimethoxysilane (3-APMS)-modified silicon surfaces by electrostatic interactions between negatively charged amino acids of ferritin molecules and amino terminal functional groups of 3-APMS. Heat treatments were performed at 400 degrees C for 60 min to fabricate two-dimensional nanodots based on ferritin cores. XPS and FT-IR results clearly indicate that ferritin shells were composed of amino acids and 3-APMS modifiers on silicon surfaces were eliminated by heat treatment. Nanodots on substrate surfaces corresponded to iron oxides. The size of nanodots was tunable in the range of 0-5 (+/- 0.75) nm by in situ reactions of iron ion chelators with ferritin molecules immobilized on substrates before heat treatment. (c) 2006 Elsevier Inc. All rights reserved.