The maximum likelihood method is frequently used in parameter estimation. If the structure of the model is unknown, the maximization of the likelihood function can be replaced by minimizing an information criterion. One criterion that allows this to be done is Akaike＇s information criterion (AIC). Minimizing the AIC is a mixed integer non-linear programming (MINLP) problem. In this paper, three different MINLP algorithms are compared in the solution of a simultaneous model structure determination and parameter estimation problem by minimizing the AIC criterion. The problem considered appears in quantitative Fourier transformed infra red (FTIR) spectroscopy where concentration estimates of certain gas components are to be obtained from measured absorbances at different wave numbers. The resulting problem is a large MINLP problem containing several hundreds, or even thousands, of variables including a huge number of possible model structures. It is, however, found that the studied algorithms solve the considered problem in quite a small number of iterations and a reasonable CPU-time.