Biomacromolecules, Vol.6, No.6, 3220-3226, 2005
Structure of model peptides based on Nephila clavipes dragline silk spidroin (MaSp1) studied by C-13 cross polarization/magic angle spinning NMR
To obtain detailed structural information for spider dragline spidroin (MaSp1), we prepared three versions of the consensus peptide GGLGGQGAGAAAAAAGGAGQGGYGGLGSQGAGR labeled with C-13 at six different sites. The C-13 CP/MAS NMR spectra were observed after treating the peptides with different reagents known to alter silk protein conformations. The conformation-dependent C-13 NMR chemical shifts and peak deconvolution were used to determine the local structure and the fractional compositions of the conformations, respectively. After trifluoroacetic acid (solvent)/diethyl ether (coagulant) treatment, the N-terminal region of poly-Ala (PLA) sequence, Ala(8) and Ala(10), adopted predominantly the alpha-helix with a substantial amount of beta-sheet. The central region, Ala(15), Ala(18), and Leu(26), and C-terminal region, Ala(31), of the peptide were dominated by either 3(1)-helix or alpha-helix. There was no indication of P-sheet, although peak broadening indicates that the torsion angle distribution is relatively large. After 9 M LiBr/dialysis treatment, three kinds of conformation, beta-sheet, random coil, and 3(1)-helix, appeared, in almost equal amounts of P-sheet and random coil conformations for Ala8 and Ala10 residues and distorted 31-helix at the central region of the peptide. In contrast, after formic acid/methanol and 8 M urea/acetonitrile treatments, all of the local structure tends to P-sheet, although small amounts of random coil are also observed. The peak pattern of the Ala C-beta carbon after 8 M urea/acetonitrile treatment is similar to the corresponding patterns of silk fiber from Bombyx mori and Samia cynthia ricini. We also synthesized a longer C-13-labeled peptide containing two PLA blocks and three Gly-rich blocks. After 8 M urea/acetonitrile treatment, the conformation pattern was closely similar to that of the shorter peptide.