In advanced drug delivery systems, drug permeation rate is the key parameter that governs performance. Among the factors that influence the permeation rate, partition effect is presently given less attention. In the first part of this study [L Shang, S. Zhang, H. Du, S S. Venkatraman, A novel approach for the control of drug release rate through hydrogel membrane. I. Effect of drug immobilization on drug release rate by copolymerization method. Eur. J. Pharm. Biopharm. 68 (2008) 715-723], a scheme was proposed to alter the drug release rate through controlling the partition behavior by immobilizing drug molecules in the membrane. It was hypothesized that the immobilized drug contributes to the total chemical potential of all drug molecules, resulting in a reduction in the partition coefficient. In this paper, the working mechanism of the control scheme is studied through thermodynamic modeling on the assumption that substances in the system are dependent upon one another (rather than independent as they are usually treated). Experimental results provide satisfactory verification of the model. With this model, drug permeation rate can be quantitatively tailored. (c) 2008 Elsevier B.V. All rights reserved.