A pore scale model of a polymer electrolyte membrane (PEM) fuel cell cathode catalyst layer is developed which accounts for species transport, electrochemical reactions and thermal transport. Effective transport parameters are computed over a range of operating conditions including the effective oxygen diffusivity, effective water vapor diffusivity, effective proton conductivity, effective electron conductivity and the effective thermal conductivity. In addition, the total amount of oxygen consumption is computed for different operating conditions. Finally, a critical assessment of the impact of assumptions made in the absence of detailed morphological data is presented. (c) 2010 Elsevier B.V. All rights reserved.