Journal of Structural Biology, Vol.171, No.1, 64-73, 2010
Prediction of protein crystallization outcome using a hybrid method
The great power of protein crystallography to reveal biological structure is often limited by the tremendous effort required to produce suitable crystals. A hybrid crystal growth predictive model is presented that combines both experimental and sequence-derived data from target proteins, including novel variables derived from physico-chemical characterization such as R-30, the ratio between a protein's DSF intensity at 30 degrees C and at T-m. This hybrid model is shown to be more powerful than sequence-based prediction alone - and more likely to be useful for prioritizing and directing the efforts of structural genomics and individual structural biology laboratories. (C) 2010 Elsevier Inc. All rights reserved.
Keywords:Crystal growth;Protein characterization;Thermal shift assay;Dynamic light scattering;Limited proteolysis;Regression partition tree