A free-piston linear alternator (FPLA) is being developed by the Beijing Institute of Technology to improve the thermal efficiency relative to conventional crank-driven engines. A two-stroke scavenging process recharges the engine and is crucial to realizing the continuous operation of a free-piston engine. In order to study the FPLA scavenging process, the scavenging system was configured using computational fluid dynamics. As the piston dynamics of the FPLA are different to conventional crank-driven two-stroke engines, a time-based numerical simulation program was built using Matlab to define the piston's motion profiles. A wide range of design and operating options were investigated including effective stroke length, valve overlapping distance, operating frequency and charging pressure to find out their effects on the scavenging performance. The results indicate that a combination of high effective stroke length to bore ratio and long valve overlapping distance with a low supercharging pressure has the potential to achieve high scavenging and trapping efficiencies with low short-circuiting losses. (C) 2010 Elsevier Ltd. All rights reserved.