| 1 |
Dynamic stacking of an expected branch point adenosine in duplexes containing pseudouridine-modified or unmodified U2 snRNA sites
Kennedy SD, Bauer WJ, Wang WH, Kielkopf CL
Biochemical and Biophysical Research Communications, 511(2), 416, 2019 |
| 2 |
Disagreement Between the Structure of the dTpT Thymine Pair Determined by NMR and Molecular Dynamics Simulations Using Amber 14 Force Fields
Nganou C, Kennedy SD, McCamant DW
Journal of Physical Chemistry B, 120(7), 1250, 2016 |
| 3 |
Optimization of an AMBER Force Field for the Artificial Nucleic Acid, LNA, and Benchmarking with NMR of L(CAAU)
Condon DE, Yildirim I, Kennedy SD, Mort BC, Kierzek R, Turner DH
Journal of Physical Chemistry B, 118(5), 1216, 2014 |
| 4 |
Benchmarking AMBER Force Fields for RNA: Comparisons to NMR Spectra for Single-Stranded r(GACC) Are Improved by Revised chi Torsions
Yildirim I, Stern HA, Tubbs JD, Kennedy SD, Turner DH
Journal of Physical Chemistry B, 115(29), 9261, 2011 |
| 5 |
NMR-assisted prediction of RNA secondary structure: Identification of a probable pseudoknot in the coding region of an r2 Retrotransposon
Hart JM, Kennedy SD, Mathews DH, Turner DH
Journal of the American Chemical Society, 130(31), 10233, 2008 |
| 6 |
Stacking effects on local structure in RNA: Changes in the structure of tandem GA pairs when flanking GC pairs are replaced by isoG-isoC pairs
Chen G, Kierzek R, Yildirim I, Krugh TR, Turner DH, Kennedy SD
Journal of Physical Chemistry B, 111(24), 6718, 2007 |
| 7 |
Theoretical and experimental characterization of NMR transverse relaxation process related to intermolecular dipolar interactions
Zhong JH, Chen Z, Zheng SK, Kennedy SD
Chemical Physics Letters, 350(3-4), 260, 2001 |
